Package apps

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Overview ▾

Package apps provides simplified wrappers around computational biology tools that are typically operated from the command line.

Index ▾

Package files



Name      Synopsis
blast      Package blast provides functions and types to help with running any of the BLAST suite of programs.
hhsuite      Package hhsuite provides convenient wrappers for running programs found in hhsuite like hhsearch, hhblits and hhmake.
matt      Package matt provides a relatively bare bones blackbox for running Matt and easily gathering results like RMSD, core length and a p-value.
          rmsd      Example rmsd shows how to use the matt package to invoke Matt on multiple argument sets in parallel.